STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX83034.1DNA-binding transcriptional regulator, LysR family; Low-quality sequence region; manually curated; Belongs to the LysR transcriptional regulatory family. (292 aa)    
Predicted Functional Partners:
CUX80080.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.717
CUX81554.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.701
afuA-2
ABC-type Fe3+ transport system, substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
  
  0.632
oxyR
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.570
gltB
Glutamate synthase (NADPH) large subunit.
 
   
 0.478
nhaR
LysR family transcriptional regulator, transcriptional activator of nhaA; Belongs to the LysR transcriptional regulatory family.
  
     0.466
CUX82161.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.443
Ga0058931_0053
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.406
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.