STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idnOGluconate 5-dehydrogenase. (251 aa)    
Predicted Functional Partners:
CUX83193.1
Threonine dehydrogenase.
 
 
  0.951
CUX83974.1
Acyl transferase domain-containing protein.
  
 0.940
hpsN
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
     0.861
gltB
Glutamate synthase (NADPH) large subunit.
     
 0.824
CUX83970.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.818
CUX83958.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.774
fabD
[acyl-carrier-protein] S-malonyltransferase.
 
 0.773
CUX83217.1
Ferredoxin-NADP reductase.
   
 0.738
paaE
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.738
CUX83199.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.723
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.