STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX83225.1DNA-binding transcriptional regulator, FadR family. (243 aa)    
Predicted Functional Partners:
amt-2
Ammonium transporter (TC 1.A.11).
 
     0.867
CUX83217.1
Ferredoxin-NADP reductase.
 
  
  0.801
CUX83227.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
     0.774
paaE
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.722
CUX83215.1
Hypothetical protein.
  
     0.677
gcvT-3
Aminomethyltransferase; Belongs to the GcvT family.
  
     0.663
suyR
GntR family transcriptional regulator.
  
    0.591
CUX83222.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
 
    0.560
nagQ
GntR family transcriptional regulator.
  
    0.558
gcvT-4
Aminomethyltransferase; Belongs to the GcvT family.
  
     0.556
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.