STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX84016.1Extensin-like protein C-terminus; Low-quality sequence region; manually curated. (226 aa)    
Predicted Functional Partners:
tyrC
Cyclohexadieny/prephenate dehydrogenase.
 
     0.855
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.803
CUX84011.1
S-adenosylmethionine uptake transporter.
       0.498
ycjF
Putative membrane protein.
  
     0.448
ygfZ
Hypothetical protein; Belongs to the GcvT family.
  
    0.423
CUX83481.1
Hypothetical protein.
  
     0.417
CUX83622.1
Hypothetical protein.
  
     0.413
Your Current Organism:
Roseibaca calidilacus
NCBI taxonomy Id: 1666912
Other names: R. calidilacus, Rhodobacteraceae bacterium HL-91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.