STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPP91998.1Putative flagellar system-associated repeat. (1142 aa)    
Predicted Functional Partners:
lapE
Type 1 adhesin secretion system secretin component LapE.
 
 
  0.922
lapB
Type 1 adhesin secretion system ATPase component LapB.
 
 
 0.918
lapC
Type 1 adhesin secretion system membrane fusion component LapC.
 
 
  0.882
KPP91205.1
Putative Ca2+-binding protein.
  
  0.685
KPP92024.1
Hemolysin-type calcium-binding repeat (2 copies)/Hint domain.
  
  0.670
KPP86199.1
LysM domain.
  
 
   0.659
ftsK
DNA segregation ATPase FtsK.
    
   0.594
KPP89237.1
Putative Ca2+-binding protein.
  
  0.580
prc
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
  0.542
KPP89027.1
Hemolysin-type calcium-binding repeat (2 copies).
   
  0.523
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA08
NCBI taxonomy Id: 1666913
Other names: R. bacterium HLUCCA08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.