STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPP93170.1Peptidase inhibitor I78 family. (94 aa)    
Predicted Functional Partners:
KPP93171.1
Peptidase inhibitor I78 family.
 
    
0.765
KPP93169.1
Protein of unknown function (DUF2794).
       0.655
KPP93172.1
Prokaryotic membrane lipoprotein lipid attachment site.
       0.547
KPP86849.1
Hypothetical protein.
  
     0.524
KPP89119.1
Hypothetical protein.
  
     0.516
KPP89120.1
Hypothetical protein.
  
     0.501
KPP86168.1
Hypothetical protein.
  
     0.492
KPP88995.1
Bacterial pre-peptidase C-terminal domain.
  
     0.463
KPP84008.1
Hypothetical protein.
  
     0.419
frmA
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase FrmA; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
       0.404
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA08
NCBI taxonomy Id: 1666913
Other names: R. bacterium HLUCCA08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.