STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tctBTTT-type tricarboxylate uptake system small permease component TctB. (163 aa)    
Predicted Functional Partners:
tctC
TTT-type tricarboxylate uptake system substrate-binding component TctC.
 
 
 0.988
tctA
TTT-type tricarboxylate uptake system large permease component TctA.
 
 
 0.982
KPP85238.1
TTT type transport system substrate-binding component.
  
 
 0.901
tctE
Two-component system, OmpR family, sensor histidine kinase TctE.
 
     0.857
gltA
Citrate synthase.
 
     0.846
KPP85240.1
TTT type transport system large permease component.
  
 
 0.843
afuA-3
iron(III) transport system substrate-binding protein.
 
     0.833
KPP85071.1
Putative ammonia monooxygenase.
  
    0.820
KPP85073.1
Putative acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
    0.759
tctD
Two-component system, OmpR family, response regulator TctD.
 
     0.703
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA08
NCBI taxonomy Id: 1666913
Other names: R. bacterium HLUCCA08
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