STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPP87937.1LacI family transcriptional regulator. (333 aa)    
Predicted Functional Partners:
gltB
NADPH/NADH glutamate synthase large subunit GltB.
    
 
 0.935
iolC
5-dehydro-2-deoxygluconokinase IolC; Belongs to the carbohydrate kinase PfkB family.
  
 
  0.707
iolB-2
5-deoxy-glucuronate isomerase IolB.
  
     0.652
hpr
Phosphocarrier protein Hpr.
   
 
 0.621
iolE
Myo-inosose-2 dehydratase IolE.
  
    0.587
KPP87936.1
Putative dehydrogenase.
  
     0.574
fbaA-2
Class II fructose-bisphosphate aldolase FbaA.
  
 
   0.550
KPP87938.1
LacI family transcriptional regulator.
  
 
  0.499
prsA
Ribose-phosphate diphosphokinase PrsA; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 
  0.440
KPP87942.1
ABC-type inositol uptake system ATPase component.
 
 
  0.438
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA08
NCBI taxonomy Id: 1666913
Other names: R. bacterium HLUCCA08
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.