STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadATad secretion system ATPase TadA. (484 aa)    
Predicted Functional Partners:
tadB
Tad secretion system assembly platform protein TadB.
 
  
 0.980
tadC
Tad secretion system assembly platform protein TadC.
 
  
 0.974
tadZ
Tad secretion system pilus assembly protein TadZ.
 
  
 0.957
rcpA
Tad secretion system secretin RcpA; Belongs to the bacterial secretin family.
  
 0.929
rcpC
Tad secretion system pilus assembly protein RcpC.
 
  
 0.897
KPP84928.1
TPR repeat.
 
    0.778
KPP84927.1
Flp pilus assembly protein TadD.
 
    0.764
KPP84924.1
Hypothetical protein.
 
     0.742
tadV
Tad secretion system prepilin peptidase TadV.
 
     0.727
trbC
P-type conjugative transfer system protein TrbC.
    
 0.669
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA08
NCBI taxonomy Id: 1666913
Other names: R. bacterium HLUCCA08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.