STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPP87400.1Putative outer membrane protein. (304 aa)    
Predicted Functional Partners:
motB-2
Chemotaxis protein MotB.
 
 0.777
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.707
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.624
KPP87669.1
Periplasmic chaperone for outer membrane proteins Skp.
  
 
 0.527
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
     0.494
KPP84722.1
Cytochrome c.
    
  0.474
KPP87399.1
Hypothetical protein.
       0.470
motB
Chemotaxis protein MotB.
   
 0.460
flgE
Flagellar hook protein FlgE.
   
  0.457
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
   0.449
Your Current Organism:
Rhodobacteraceae bacterium HLUCCO07
NCBI taxonomy Id: 1666914
Other names: R. bacterium HLUCCO07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.