Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPQ07342.1 | KPQ07391.1 | HLUCCA12_05890 | HLUCCA12_06135 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.998 |
KPQ07342.1 | fadD | HLUCCA12_05890 | HLUCCA12_00350 | Signal transduction histidine kinase. | Long-chain acyl-CoA synthetase. | 0.743 |
KPQ07391.1 | KPQ07342.1 | HLUCCA12_06135 | HLUCCA12_05890 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.998 |
KPQ07391.1 | fadD | HLUCCA12_06135 | HLUCCA12_00350 | Signal transduction histidine kinase. | Long-chain acyl-CoA synthetase. | 0.743 |
fadD | KPQ07342.1 | HLUCCA12_00350 | HLUCCA12_05890 | Long-chain acyl-CoA synthetase. | Signal transduction histidine kinase. | 0.743 |
fadD | KPQ07391.1 | HLUCCA12_00350 | HLUCCA12_06135 | Long-chain acyl-CoA synthetase. | Signal transduction histidine kinase. | 0.743 |
fadD | gmk | HLUCCA12_00350 | HLUCCA12_01665 | Long-chain acyl-CoA synthetase. | Guanylate kinase Gmk; Essential for recycling GMP and indirectly, cGMP. | 0.737 |
fadD | livF | HLUCCA12_00350 | HLUCCA12_00335 | Long-chain acyl-CoA synthetase. | Branched-chain amino acid transport system ATP-binding protein. | 0.922 |
fadD | livG | HLUCCA12_00350 | HLUCCA12_00355 | Long-chain acyl-CoA synthetase. | Branched-chain amino acid transport system ATP-binding protein. | 0.896 |
fadD | livH | HLUCCA12_00350 | HLUCCA12_00345 | Long-chain acyl-CoA synthetase. | Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.890 |
fadD | livK | HLUCCA12_00350 | HLUCCA12_00330 | Long-chain acyl-CoA synthetase. | Branched-chain amino acid transport system substrate-binding protein. | 0.925 |
fadD | livK-11 | HLUCCA12_00350 | HLUCCA12_15080 | Long-chain acyl-CoA synthetase. | Branched-chain amino acid transport system substrate-binding protein. | 0.770 |
fadD | livM | HLUCCA12_00350 | HLUCCA12_00340 | Long-chain acyl-CoA synthetase. | Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.928 |
fadD | paaK-2 | HLUCCA12_00350 | HLUCCA12_15070 | Long-chain acyl-CoA synthetase. | phenylacetate-CoA ligase. | 0.768 |
gmk | fadD | HLUCCA12_01665 | HLUCCA12_00350 | Guanylate kinase Gmk; Essential for recycling GMP and indirectly, cGMP. | Long-chain acyl-CoA synthetase. | 0.737 |
livF | fadD | HLUCCA12_00335 | HLUCCA12_00350 | Branched-chain amino acid transport system ATP-binding protein. | Long-chain acyl-CoA synthetase. | 0.922 |
livF | livG | HLUCCA12_00335 | HLUCCA12_00355 | Branched-chain amino acid transport system ATP-binding protein. | Branched-chain amino acid transport system ATP-binding protein. | 0.877 |
livF | livH | HLUCCA12_00335 | HLUCCA12_00345 | Branched-chain amino acid transport system ATP-binding protein. | Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.959 |
livF | livK | HLUCCA12_00335 | HLUCCA12_00330 | Branched-chain amino acid transport system ATP-binding protein. | Branched-chain amino acid transport system substrate-binding protein. | 0.879 |
livF | livK-11 | HLUCCA12_00335 | HLUCCA12_15080 | Branched-chain amino acid transport system ATP-binding protein. | Branched-chain amino acid transport system substrate-binding protein. | 0.516 |
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