Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPQ07937.1 | KPQ07942.1 | HLUCCA12_02390 | HLUCCA12_02415 | Hypothetical protein. | Hypothetical protein. | 0.453 |
KPQ07937.1 | cycA | HLUCCA12_02390 | HLUCCA12_02385 | Hypothetical protein. | Monoheme cytochrome c. | 0.550 |
KPQ07937.1 | fdoG | HLUCCA12_02390 | HLUCCA12_02410 | Hypothetical protein. | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.445 |
KPQ07937.1 | fdoH | HLUCCA12_02390 | HLUCCA12_02405 | Hypothetical protein. | Formate dehydrogenase iron-sulfur subunit. | 0.432 |
KPQ07937.1 | fdoI | HLUCCA12_02390 | HLUCCA12_02400 | Hypothetical protein. | NAD-dependent formate dehydrogenase gamma subunit FdoI. | 0.507 |
KPQ07937.1 | mrp | HLUCCA12_02390 | HLUCCA12_02395 | Hypothetical protein. | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.625 |
KPQ07942.1 | KPQ07937.1 | HLUCCA12_02415 | HLUCCA12_02390 | Hypothetical protein. | Hypothetical protein. | 0.453 |
KPQ07942.1 | fdoG | HLUCCA12_02415 | HLUCCA12_02410 | Hypothetical protein. | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.803 |
KPQ07942.1 | fdoH | HLUCCA12_02415 | HLUCCA12_02405 | Hypothetical protein. | Formate dehydrogenase iron-sulfur subunit. | 0.789 |
KPQ07942.1 | fdoI | HLUCCA12_02415 | HLUCCA12_02400 | Hypothetical protein. | NAD-dependent formate dehydrogenase gamma subunit FdoI. | 0.757 |
KPQ07942.1 | mrp | HLUCCA12_02415 | HLUCCA12_02395 | Hypothetical protein. | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.472 |
cycA | KPQ07937.1 | HLUCCA12_02385 | HLUCCA12_02390 | Monoheme cytochrome c. | Hypothetical protein. | 0.550 |
cycA | fdoG | HLUCCA12_02385 | HLUCCA12_02410 | Monoheme cytochrome c. | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.972 |
cycA | fdoH | HLUCCA12_02385 | HLUCCA12_02405 | Monoheme cytochrome c. | Formate dehydrogenase iron-sulfur subunit. | 0.961 |
cycA | fdoI | HLUCCA12_02385 | HLUCCA12_02400 | Monoheme cytochrome c. | NAD-dependent formate dehydrogenase gamma subunit FdoI. | 0.850 |
cycA | mrp | HLUCCA12_02385 | HLUCCA12_02395 | Monoheme cytochrome c. | ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.522 |
fdoG | KPQ07937.1 | HLUCCA12_02410 | HLUCCA12_02390 | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.445 |
fdoG | KPQ07942.1 | HLUCCA12_02410 | HLUCCA12_02415 | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.803 |
fdoG | cycA | HLUCCA12_02410 | HLUCCA12_02385 | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Monoheme cytochrome c. | 0.972 |
fdoG | fdoH | HLUCCA12_02410 | HLUCCA12_02405 | Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase iron-sulfur subunit. | 0.999 |
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