STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ07945.1Protein of unknown function (DUF3305). (176 aa)    
Predicted Functional Partners:
KPQ07944.1
Protein of unknown function (DUF3306).
 
    0.988
KPQ07948.1
Biotin-(acetyl-CoA carboxylase) ligase.
 
    0.951
KPQ07947.1
Hypothetical protein.
 
     0.950
KPQ07946.1
Seed maturation protein.
 
     0.946
KPQ07943.1
Putative anaerobic dehydrogenase component.
 
    0.925
KPQ07949.1
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits.
 
    0.913
fdhD
FdhF sulfurtransferase FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
 
 0.899
fdoG
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.880
fdoI
NAD-dependent formate dehydrogenase gamma subunit FdoI.
 
     0.870
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein MobB.
 
 0.869
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.