STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uraHHydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (118 aa)    
Predicted Functional Partners:
KPQ07650.1
Chitin deacetylase.
 
 0.989
allA
Ureidoglycolate lyase AllA.
 
    0.862
KPQ07654.1
Putative membrane protein.
 
  
 0.837
xdhB
Xanthine dehydrogenase molybdopterin binding subunit XdhB.
 
  
 0.823
KPQ07353.1
Putative xylanase/chitin deacetylase.
 
 
  0.797
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.785
xdhA
Xanthine dehydrogenase FeS/FAD binding subunit XdhA.
 
     0.782
ylbA
(S)-ureidoglycine aminohydrolase.
 
   
 0.778
xdhC-2
Xanthine dehydrogenase accessory protein XdhC.
 
     0.745
KPQ07652.1
Glycosyltransferase.
  
    0.739
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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