STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ07784.1ADP-ribose pyrophosphatase. (152 aa)    
Predicted Functional Partners:
nadE
NAD+ synthetase NadE; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.711
gcvP
Decarboxylating glycine dehydrogenase GcvP; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.683
KPQ07785.1
Alpha/beta hydrolase family.
  
    0.644
KPQ06647.1
Signal transduction histidine kinase.
  
 
  0.542
KPQ05447.1
PAS domain S-box.
  
 
  0.542
KPQ01764.1
Signal transduction histidine kinase.
  
 
  0.542
korA
2-oxoglutarate ferredoxin oxidoreductase alpha subunit KorA.
    
 0.535
KPQ07173.1
Putative membrane-associated protein.
  
  
 0.532
guaA
GMP synthase (glutamine-hydrolysing) GuaA; Catalyzes the synthesis of GMP from XMP.
    
  0.515
KPQ08246.1
Putative soluble lytic transglycosylase.
  
     0.512
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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