STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ07810.1Tripartite ATP-independent periplasmic transporter, DctQ component. (199 aa)    
Predicted Functional Partners:
KPQ07809.1
TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.975
KPQ07811.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
  0.956
KPQ06597.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.916
KPQ07365.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.865
KPQ07136.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.842
KPQ04314.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.815
KPQ04313.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.779
KPQ07134.1
TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
  0.778
KPQ05685.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.726
KPQ07368.1
TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
  
  0.723
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.