Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPQ07342.1 | KPQ07391.1 | HLUCCA12_05890 | HLUCCA12_06135 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.998 |
KPQ07342.1 | KPQ07462.1 | HLUCCA12_05890 | HLUCCA12_06495 | Signal transduction histidine kinase. | Arabinose efflux permease. | 0.408 |
KPQ07342.1 | polA | HLUCCA12_05890 | HLUCCA12_16920 | Signal transduction histidine kinase. | DNA polymerase I PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.701 |
KPQ07391.1 | KPQ07342.1 | HLUCCA12_06135 | HLUCCA12_05890 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.998 |
KPQ07391.1 | KPQ07462.1 | HLUCCA12_06135 | HLUCCA12_06495 | Signal transduction histidine kinase. | Arabinose efflux permease. | 0.408 |
KPQ07391.1 | polA | HLUCCA12_06135 | HLUCCA12_16920 | Signal transduction histidine kinase. | DNA polymerase I PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.701 |
KPQ07460.1 | KPQ07462.1 | HLUCCA12_06485 | HLUCCA12_06495 | Hypothetical protein. | Arabinose efflux permease. | 0.432 |
KPQ07460.1 | dehII | HLUCCA12_06485 | HLUCCA12_06490 | Hypothetical protein. | Haloacid dehalogenase, type II. | 0.536 |
KPQ07462.1 | KPQ07342.1 | HLUCCA12_06495 | HLUCCA12_05890 | Arabinose efflux permease. | Signal transduction histidine kinase. | 0.408 |
KPQ07462.1 | KPQ07391.1 | HLUCCA12_06495 | HLUCCA12_06135 | Arabinose efflux permease. | Signal transduction histidine kinase. | 0.408 |
KPQ07462.1 | KPQ07460.1 | HLUCCA12_06495 | HLUCCA12_06485 | Arabinose efflux permease. | Hypothetical protein. | 0.432 |
KPQ07462.1 | afuA | HLUCCA12_06495 | HLUCCA12_07825 | Arabinose efflux permease. | iron(III) transport system substrate-binding protein. | 0.500 |
KPQ07462.1 | afuA-2 | HLUCCA12_06495 | HLUCCA12_17335 | Arabinose efflux permease. | iron(III) transport system substrate-binding protein. | 0.500 |
KPQ07462.1 | dehII | HLUCCA12_06495 | HLUCCA12_06490 | Arabinose efflux permease. | Haloacid dehalogenase, type II. | 0.611 |
KPQ07462.1 | polA | HLUCCA12_06495 | HLUCCA12_16920 | Arabinose efflux permease. | DNA polymerase I PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.459 |
afuA | KPQ07462.1 | HLUCCA12_07825 | HLUCCA12_06495 | iron(III) transport system substrate-binding protein. | Arabinose efflux permease. | 0.500 |
afuA | afuA-2 | HLUCCA12_07825 | HLUCCA12_17335 | iron(III) transport system substrate-binding protein. | iron(III) transport system substrate-binding protein. | 0.857 |
afuA-2 | KPQ07462.1 | HLUCCA12_17335 | HLUCCA12_06495 | iron(III) transport system substrate-binding protein. | Arabinose efflux permease. | 0.500 |
afuA-2 | afuA | HLUCCA12_17335 | HLUCCA12_07825 | iron(III) transport system substrate-binding protein. | iron(III) transport system substrate-binding protein. | 0.857 |
dehII | KPQ07460.1 | HLUCCA12_06490 | HLUCCA12_06485 | Haloacid dehalogenase, type II. | Hypothetical protein. | 0.536 |
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