STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ07091.1acyl-CoA dehydrogenase. (391 aa)    
Predicted Functional Partners:
KPQ07090.1
Hypothetical protein.
    
  0.841
fadJ
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 0.822
fixB
Electron transfer flavoprotein alpha subunit FixB.
 0.814
KPQ07092.1
Transcriptional regulator, IclR family.
    
  0.778
fadN
3-hydroxyacyl-CoA dehydrogenase.
  
 0.771
fadN-2
3-hydroxyacyl-CoA dehydrogenase.
  
 0.771
KPQ06993.1
Putative polyketide synthase module.
  
 
 0.698
fixA
Electron transfer flavoprotein beta subunit FixA.
 
 0.695
mph
Macrolide phosphotransferase.
 
 0.695
KPQ07086.1
Zn-binding dehydrogenase.
  
  0.695
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.