STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY-2Two-component system, chemotaxis family, response regulator CheY. (128 aa)    
Predicted Functional Partners:
cheA
Chemotaxis signal relay system histidine kinase CheA.
 
 0.999
cheW
Chemotaxis signal relay system purine-binding protiein CheW.
 
 
 0.994
KPQ07342.1
Signal transduction histidine kinase.
 
 
 0.982
KPQ07391.1
Signal transduction histidine kinase.
 
 
 0.982
fliM
Flagellar motor switch protein FliM.
  
 0.981
KPQ01764.1
Signal transduction histidine kinase.
 
 
 0.980
KPQ06647.1
Signal transduction histidine kinase.
 
 
 0.978
cheY
Two-component system, chemotaxis family, response regulator CheY.
 
  
0.977
cheR
Chemotaxis signal relay system methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 
 0.976
KPQ05447.1
PAS domain S-box.
   
 0.966
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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