STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ06129.1Putative permease, DMT superfamily. (277 aa)    
Predicted Functional Partners:
KPQ06130.1
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
       0.746
KPQ06133.1
Methyltransferase domain.
  
    0.566
neuB
N-acetylneuraminate synthase NeuB.
       0.550
KPQ06132.1
WbqC-like protein family.
       0.550
KPQ06134.1
Methyltransferase domain.
       0.550
KPQ06135.1
Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase.
       0.550
pseF
Pseudaminic acid cytidylyltransferase.
       0.550
pseC
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.550
pseB
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
       0.550
KPQ07785.1
Alpha/beta hydrolase family.
      0.471
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.