STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ05887.1Amino acid synthesis. (194 aa)    
Predicted Functional Partners:
KPQ05888.1
Enamidase.
 
     0.947
KPQ05886.1
MarR family transcriptional regulator.
 
     0.908
KPQ05880.1
6-hydroxynicotinate reductase.
 
     0.818
KPQ05881.1
Hypothetical protein.
 
     0.818
KPQ05879.1
Putative aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL.
 
     0.792
KPQ05878.1
Putative aerobic-type carbon monoxide dehydrogenase, middle subunit.
 
     0.664
tctA-2
Putative tricarboxylic transport membrane protein.
       0.570
KPQ05890.1
Tripartite tricarboxylate transporter TctB family.
       0.570
KPQ05891.1
Hypothetical protein.
       0.570
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.