Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPQ05853.1 | cydA | HLUCCA12_13815 | HLUCCA12_13805 | Protein of unknown function (DUF2474). | Cytochrome d ubiquinol oxidase subunit I CydA. | 0.773 |
KPQ05853.1 | cydB | HLUCCA12_13815 | HLUCCA12_13810 | Protein of unknown function (DUF2474). | Cytochrome d ubiquinol oxidase subunit II CydB. | 0.773 |
KPQ05853.1 | nsrR-4 | HLUCCA12_13815 | HLUCCA12_13800 | Protein of unknown function (DUF2474). | Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor. | 0.565 |
cydA | KPQ05853.1 | HLUCCA12_13805 | HLUCCA12_13815 | Cytochrome d ubiquinol oxidase subunit I CydA. | Protein of unknown function (DUF2474). | 0.773 |
cydA | cydB | HLUCCA12_13805 | HLUCCA12_13810 | Cytochrome d ubiquinol oxidase subunit I CydA. | Cytochrome d ubiquinol oxidase subunit II CydB. | 0.999 |
cydA | nsrR-4 | HLUCCA12_13805 | HLUCCA12_13800 | Cytochrome d ubiquinol oxidase subunit I CydA. | Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor. | 0.591 |
cydB | KPQ05853.1 | HLUCCA12_13810 | HLUCCA12_13815 | Cytochrome d ubiquinol oxidase subunit II CydB. | Protein of unknown function (DUF2474). | 0.773 |
cydB | cydA | HLUCCA12_13810 | HLUCCA12_13805 | Cytochrome d ubiquinol oxidase subunit II CydB. | Cytochrome d ubiquinol oxidase subunit I CydA. | 0.999 |
cydB | nsrR-4 | HLUCCA12_13810 | HLUCCA12_13800 | Cytochrome d ubiquinol oxidase subunit II CydB. | Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor. | 0.576 |
nsrR-4 | KPQ05853.1 | HLUCCA12_13800 | HLUCCA12_13815 | Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor. | Protein of unknown function (DUF2474). | 0.565 |
nsrR-4 | cydA | HLUCCA12_13800 | HLUCCA12_13805 | Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor. | Cytochrome d ubiquinol oxidase subunit I CydA. | 0.591 |
nsrR-4 | cydB | HLUCCA12_13800 | HLUCCA12_13810 | Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor. | Cytochrome d ubiquinol oxidase subunit II CydB. | 0.576 |