Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPQ01764.1 | KPQ05447.1 | HLUCCA12_17295 | HLUCCA12_15180 | Signal transduction histidine kinase. | PAS domain S-box. | 0.999 |
KPQ01764.1 | KPQ05535.1 | HLUCCA12_17295 | HLUCCA12_14780 | Signal transduction histidine kinase. | Sulfotransferase family. | 0.886 |
KPQ01764.1 | KPQ06647.1 | HLUCCA12_17295 | HLUCCA12_10195 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.998 |
KPQ01764.1 | cycA | HLUCCA12_17295 | HLUCCA12_02385 | Signal transduction histidine kinase. | Monoheme cytochrome c. | 0.755 |
KPQ01764.1 | dnaK | HLUCCA12_17295 | HLUCCA12_05515 | Signal transduction histidine kinase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.713 |
KPQ01764.1 | rpoB | HLUCCA12_17295 | HLUCCA12_05430 | Signal transduction histidine kinase. | DNA-directed RNA polymerase beta subunit RpoB; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.439 |
KPQ01764.1 | rpoZ | HLUCCA12_17295 | HLUCCA12_02495 | Signal transduction histidine kinase. | DNA-directed RNA polymerase omega subunit RpoZ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.484 |
KPQ05447.1 | KPQ01764.1 | HLUCCA12_15180 | HLUCCA12_17295 | PAS domain S-box. | Signal transduction histidine kinase. | 0.999 |
KPQ05447.1 | KPQ05535.1 | HLUCCA12_15180 | HLUCCA12_14780 | PAS domain S-box. | Sulfotransferase family. | 0.886 |
KPQ05447.1 | KPQ06647.1 | HLUCCA12_15180 | HLUCCA12_10195 | PAS domain S-box. | Signal transduction histidine kinase. | 0.998 |
KPQ05447.1 | cycA | HLUCCA12_15180 | HLUCCA12_02385 | PAS domain S-box. | Monoheme cytochrome c. | 0.752 |
KPQ05447.1 | dnaK | HLUCCA12_15180 | HLUCCA12_05515 | PAS domain S-box. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.713 |
KPQ05447.1 | rpoB | HLUCCA12_15180 | HLUCCA12_05430 | PAS domain S-box. | DNA-directed RNA polymerase beta subunit RpoB; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.439 |
KPQ05447.1 | rpoZ | HLUCCA12_15180 | HLUCCA12_02495 | PAS domain S-box. | DNA-directed RNA polymerase omega subunit RpoZ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.484 |
KPQ05535.1 | KPQ01764.1 | HLUCCA12_14780 | HLUCCA12_17295 | Sulfotransferase family. | Signal transduction histidine kinase. | 0.886 |
KPQ05535.1 | KPQ05447.1 | HLUCCA12_14780 | HLUCCA12_15180 | Sulfotransferase family. | PAS domain S-box. | 0.886 |
KPQ05535.1 | KPQ06647.1 | HLUCCA12_14780 | HLUCCA12_10195 | Sulfotransferase family. | Signal transduction histidine kinase. | 0.886 |
KPQ05535.1 | alaS-2 | HLUCCA12_14780 | HLUCCA12_08745 | Sulfotransferase family. | alanine-tRNA ligase AlaS; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.977 |
KPQ05535.1 | cycA | HLUCCA12_14780 | HLUCCA12_02385 | Sulfotransferase family. | Monoheme cytochrome c. | 0.980 |
KPQ05535.1 | dnaK | HLUCCA12_14780 | HLUCCA12_05515 | Sulfotransferase family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.975 |
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