STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ05517.1Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
KPQ05594.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.718
KPQ08200.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.683
KPQ02356.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.662
metR
Transcriptional regulator for metE and metH MetR; Belongs to the LysR transcriptional regulatory family.
  
     0.560
KPQ05518.1
Putative ring-cleavage extradiol dioxygenase.
       0.505
gltB
NADPH/NADH glutamate synthase large subunit GltB.
     
 0.476
fadH
2,4-dienoyl-CoA reductase (NADPH2) FadH.
  
  
 0.476
regA
Two-component system, response regulator RegA.
  
 
 
 0.403
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.