STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPQ04980.1Cbb3-type cytochrome oxidase component FixQ. (105 aa)    
Predicted Functional Partners:
KPQ07458.1
Rhomboid-like protein.
  
     0.757
lptE
ABC-type lipopolysaccharide export system outer membrane lipoprotein component LptE.
  
     0.755
KPQ06468.1
SseB protein.
  
     0.736
KPQ05800.1
Hypothetical protein.
  
     0.723
KPQ06034.1
Hypothetical protein.
  
     0.718
KPQ04979.1
Hypothetical protein.
       0.697
KPQ06759.1
Hypothetical protein.
  
     0.695
KPQ07301.1
Beta-barrel assembly machine subunit BamF.
  
    0.660
KPQ08026.1
Putative peptidoglycan binding domain.
  
     0.648
KPQ06511.1
Type IV pilus biogenesis.
  
     0.647
Your Current Organism:
Rhodobacteraceae bacterium HLUCCA12
NCBI taxonomy Id: 1666916
Other names: R. bacterium HLUCCA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.