STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512605_00172Unannotated protein. (127 aa)    
Predicted Functional Partners:
GCA_001512605_00173
Unannotated protein.
 
  
 0.963
GCA_001512605_00174
Unannotated protein.
 
    0.710
GCA_001512605_00383
Unannotated protein.
  
    0.600
GCA_001512605_00072
Unannotated protein.
 
    0.587
GCA_001512605_01859
Unannotated protein.
  
     0.567
GCA_001512605_00175
Unannotated protein.
       0.516
GCA_001512605_00171
Unannotated protein.
       0.493
GCA_001512605_00197
Unannotated protein.
 
     0.481
GCA_001512605_00176
Unannotated protein.
  
    0.433
GCA_001512605_00177
Unannotated protein.
       0.426
Your Current Organism:
Clostridia bacterium DTU014
NCBI taxonomy Id: 1671636
Other names: C. bacterium DTU014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.