STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512605_00365Unannotated protein. (265 aa)    
Predicted Functional Partners:
GCA_001512605_00424
Unannotated protein.
 
      0.889
GCA_001512605_00409
Unannotated protein.
 
    
 0.888
GCA_001512605_01085
Unannotated protein.
 
      0.834
GCA_001512605_00364
Unannotated protein.
 
    
0.809
GCA_001512605_01179
Unannotated protein.
 
    
 0.698
GCA_001512605_01240
Unannotated protein.
     
 0.555
GCA_001512605_00366
Unannotated protein.
       0.548
GCA_001512605_00368
Unannotated protein.
  
 
 0.547
GCA_001512605_00363
Unannotated protein.
  
    0.494
GCA_001512605_01443
Unannotated protein.
 
      0.461
Your Current Organism:
Clostridia bacterium DTU014
NCBI taxonomy Id: 1671636
Other names: C. bacterium DTU014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.