STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512605_01502Unannotated protein. (461 aa)    
Predicted Functional Partners:
GCA_001512605_01503
Unannotated protein.
   
 0.993
GCA_001512605_01500
Unannotated protein.
 
   
 0.945
GCA_001512605_01028
Unannotated protein.
   
    0.923
GCA_001512605_01158
Unannotated protein.
   
    0.923
GCA_001512605_01501
Unannotated protein.
 
   
0.919
GCA_001512605_01436
Unannotated protein.
  
 
 0.848
GCA_001512605_01558
Unannotated protein.
   
    0.733
GCA_001512605_02003
Unannotated protein.
 
   
 0.714
GCA_001512605_00734
Unannotated protein.
 
   
 0.705
GCA_001512605_01866
Unannotated protein.
    
 0.659
Your Current Organism:
Clostridia bacterium DTU014
NCBI taxonomy Id: 1671636
Other names: C. bacterium DTU014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.