STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512605_01970Unannotated protein. (160 aa)    
Predicted Functional Partners:
GCA_001512605_01972
Unannotated protein.
 
    
0.842
GCA_001512605_00734
Unannotated protein.
  
 0.827
GCA_001512605_02003
Unannotated protein.
  
 0.827
GCA_001512605_02001
Unannotated protein.
    
 0.777
GCA_001512605_02002
Unannotated protein.
     
 0.775
GCA_001512605_01969
Unannotated protein.
       0.773
GCA_001512605_01971
Unannotated protein.
       0.773
GCA_001512605_00735
Unannotated protein.
    
 0.703
GCA_001512605_01973
Unannotated protein.
 
     0.452
GCA_001512605_01968
Unannotated protein.
       0.420
Your Current Organism:
Clostridia bacterium DTU014
NCBI taxonomy Id: 1671636
Other names: C. bacterium DTU014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.