STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001513185_00833Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_001513185_01184
Unannotated protein.
  
 
 0.954
GCA_001513185_00834
Unannotated protein.
  
  
 0.944
GCA_001513185_00836
Unannotated protein.
 
    0.940
GCA_001513185_00835
Unannotated protein.
  
    0.917
GCA_001513185_00830
Unannotated protein.
  
  
 0.778
GCA_001513185_00832
Unannotated protein.
     
 0.663
GCA_001513185_01454
Unannotated protein.
   
   0.624
GCA_001513185_00831
Unannotated protein.
     
 0.570
GCA_001513185_00192
Unannotated protein.
   
  
 0.549
GCA_001513185_01539
Unannotated protein.
   
    0.535
Your Current Organism:
Clostridia bacterium DTU015
NCBI taxonomy Id: 1671637
Other names: C. bacterium DTU015
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.