STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512765_00491Unannotated protein. (488 aa)    
Predicted Functional Partners:
GCA_001512765_00181
Unannotated protein.
  
 
 0.909
GCA_001512765_01565
Unannotated protein.
   
 0.899
GCA_001512765_00850
Unannotated protein.
  
 
 0.890
GCA_001512765_00490
Unannotated protein.
  
    0.880
GCA_001512765_01566
Unannotated protein.
     
 0.837
GCA_001512765_00504
Unannotated protein.
    
 0.810
GCA_001512765_00693
Unannotated protein.
     
 0.801
GCA_001512765_00851
Unannotated protein.
     
 0.693
GCA_001512765_00433
Unannotated protein.
    
 0.691
GCA_001512765_01464
Unannotated protein.
    
 0.653
Your Current Organism:
Clostridiales bacterium DTU053
NCBI taxonomy Id: 1671652
Other names: C. bacterium DTU053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.