STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001513065_01771Unannotated protein. (260 aa)    
Predicted Functional Partners:
GCA_001513065_00125
Unannotated protein.
      
 0.719
GCA_001513065_01048
Unannotated protein.
    
 0.702
GCA_001513065_01674
Unannotated protein.
 
  
 0.697
GCA_001513065_01693
Unannotated protein.
     
 0.648
GCA_001513065_01322
Unannotated protein.
  
 
 0.626
GCA_001513065_00148
Unannotated protein.
    
  0.615
GCA_001513065_01003
Unannotated protein.
  
  
 0.598
GCA_001513065_00410
Unannotated protein.
 
  
  0.595
GCA_001513065_01772
Unannotated protein.
 
     0.560
GCA_001513065_01226
Unannotated protein.
 
  
 0.515
Your Current Organism:
Clostridiales bacterium DTU075
NCBI taxonomy Id: 1671659
Other names: C. bacterium DTU075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.