STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001513045_00078Unannotated protein. (888 aa)    
Predicted Functional Partners:
GCA_001513045_00077
Unannotated protein.
       0.773
GCA_001513045_02238
Unannotated protein.
 
 0.641
GCA_001513045_00573
Unannotated protein.
   
 0.617
GCA_001513045_00668
Unannotated protein.
   
 0.617
GCA_001513045_00431
Unannotated protein.
  
 0.567
GCA_001513045_01062
Unannotated protein.
  
 0.567
GCA_001513045_01242
Unannotated protein.
  
 0.567
GCA_001513045_01331
Unannotated protein.
  
 0.567
GCA_001513045_01685
Unannotated protein.
  
 0.567
GCA_001513045_01782
Unannotated protein.
    
 
 0.527
Your Current Organism:
Clostridiales bacterium DTU089
NCBI taxonomy Id: 1671661
Other names: C. bacterium DTU089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.