STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001512885_00056Unannotated protein. (544 aa)    
Predicted Functional Partners:
GCA_001512885_00085
Unannotated protein.
 
 
 0.977
GCA_001512885_01270
Unannotated protein.
  
 
 0.953
GCA_001512885_01495
Unannotated protein.
    
 0.878
GCA_001512885_01109
Unannotated protein.
  
 0.855
GCA_001512885_01135
Unannotated protein.
  
 
 0.851
GCA_001512885_00061
Unannotated protein.
  
 0.839
GCA_001512885_01204
Unannotated protein.
  
 0.834
GCA_001512885_01059
Unannotated protein.
  
 0.754
GCA_001512885_01082
Unannotated protein.
  
 
 0.743
GCA_001512885_01545
Unannotated protein.
  
 
 0.734
Your Current Organism:
Rikenellaceae bacterium DTU001
NCBI taxonomy Id: 1671664
Other names: R. bacterium DTU001
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.