STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001542995_01786Unannotated protein. (195 aa)    
Predicted Functional Partners:
GCA_001542995_00567
Unannotated protein.
    
  0.809
GCA_001542995_00692
Unannotated protein.
    
  0.769
GCA_001542995_02013
Unannotated protein.
    
  0.769
GCA_001542995_01785
Unannotated protein.
       0.668
GCA_001542995_02231
Unannotated protein.
    
 0.543
GCA_001542995_01788
Unannotated protein.
       0.503
GCA_001542995_02165
Unannotated protein.
 
    
0.419
Your Current Organism:
Nitrospina sp. LSNOB
NCBI taxonomy Id: 1671875
Other names: N. sp. LS_NOB, Nitrospina sp. LS_NOB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.