STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_0175Metal-dependent hydrolase of the beta-lactamase superfamily II. (215 aa)    
Predicted Functional Partners:
CPM_1459
Rhodanese homology domain fused to Zn-dependent hydrolase of glyoxylase family.
  
  
 
0.919
CPM_0285
Metal-dependent hydrolase of the beta-lactamase superfamily II.
  
  
 
0.908
CPM_0323
Glyoxalase-like domain protein.
     
  0.900
CPM_0174
Thiol-disulfide isomerase or thioredoxin.
   
 
 0.589
thiI
tRNA S(4)U 4-thiouridine synthase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
 
 
 0.530
CPM_1460
Rhodanese-related sulfurtransferase.
 
 
 0.506
CPM_0526
Sulfide:quinone oxidoreductase.
   
  0.482
CPM_1150
NADH oxidase.
   
  0.482
CPM_1392
Sulfide:quinone oxidoreductase.
   
  0.482
CPM_1798
Sulfide:quinone oxidoreductase.
   
  0.482
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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