STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_01762-methylcitrate synthase/citrate synthase. (385 aa)    
Predicted Functional Partners:
CPM_0277
Aconitate hydratase.
  
 0.984
CPM_0403
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.983
CPM_0220
2-oxoacid dehydrogenase multienzyme complex, dihydrolipoyl acyltransferase (E2) component.
  
 0.976
CPM_0020
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 0.969
CPM_1921
Acetyl-coenzyme A synthetase.
  
 0.969
CPM_0195
acetyl-CoA C-acyltransferase.
  
 0.935
CPM_0852
acetyl-CoA C-acetyltransferase.
  
 0.935
CPM_1362
acetyl-CoA C-acetyltransferase.
  
 0.935
pckG
Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
   
 
 0.919
CPM_0252
2-oxoacid ferredoxin oxidoreductase subunit gamma-alpha.
   
 
 0.916
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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