STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_0215NAD-dependent aldehyde dehydrogenase. (409 aa)    
Predicted Functional Partners:
CPM_1521
SSS family symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.610
CPM_0018
acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.502
CPM_0020
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 
 0.502
CPM_1921
Acetyl-coenzyme A synthetase.
  
 
 0.502
CPM_1288
Ribokinase.
  
 
 0.494
CPM_0176
2-methylcitrate synthase/citrate synthase.
  
 
 0.492
CPM_0458
Succinate dehydrogenase/fumarate reductase subunit A.
  
 
 0.492
CPM_1891
Citrate synthase.
  
 
 0.492
sucD
succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 
 0.488
CPM_0796
Alcohol dehydrogenase, class IV.
  
 
 0.476
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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