Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPM_0263 | dys | CPM_0263 | CPM_0264 | SP family major facilitator superfamily permease. | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | 0.566 |
| CPM_0751 | CPM_1896 | CPM_0751 | CPM_1896 | phenylalanyl-tRNA synthetase subunit alpha. | 30S ribosomal protein S19e. | 0.686 |
| CPM_0751 | dys | CPM_0751 | CPM_0264 | phenylalanyl-tRNA synthetase subunit alpha. | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | 0.607 |
| CPM_0751 | eif5a | CPM_0751 | CPM_1439 | phenylalanyl-tRNA synthetase subunit alpha. | Translation initiation factor aIF5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.691 |
| CPM_0751 | flpA | CPM_0751 | CPM_0375 | phenylalanyl-tRNA synthetase subunit alpha. | RNA 2'-O-methyltransferase fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.595 |
| CPM_0751 | rpl10e | CPM_0751 | CPM_1442 | phenylalanyl-tRNA synthetase subunit alpha. | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 0.900 |
| CPM_0751 | rpl13 | CPM_0751 | CPM_1473 | phenylalanyl-tRNA synthetase subunit alpha. | 50S ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.825 |
| CPM_1440 | dys | CPM_1440 | CPM_0264 | Agmatinase; Belongs to the arginase family. | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | 0.581 |
| CPM_1440 | eif5a | CPM_1440 | CPM_1439 | Agmatinase; Belongs to the arginase family. | Translation initiation factor aIF5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.966 |
| CPM_1440 | lysA | CPM_1440 | CPM_1647 | Agmatinase; Belongs to the arginase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.623 |
| CPM_1440 | pdaD | CPM_1440 | CPM_1327 | Agmatinase; Belongs to the arginase family. | Pyruvoyl-dependent arginine decarboxylase; Belongs to the PdaD family. | 0.949 |
| CPM_1896 | CPM_0751 | CPM_1896 | CPM_0751 | 30S ribosomal protein S19e. | phenylalanyl-tRNA synthetase subunit alpha. | 0.686 |
| CPM_1896 | dys | CPM_1896 | CPM_0264 | 30S ribosomal protein S19e. | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | 0.581 |
| CPM_1896 | eif5a | CPM_1896 | CPM_1439 | 30S ribosomal protein S19e. | Translation initiation factor aIF5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.989 |
| CPM_1896 | flpA | CPM_1896 | CPM_0375 | 30S ribosomal protein S19e. | RNA 2'-O-methyltransferase fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.803 |
| CPM_1896 | rpl10e | CPM_1896 | CPM_1442 | 30S ribosomal protein S19e. | 50S ribosomal protein L10e; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
| CPM_1896 | rpl13 | CPM_1896 | CPM_1473 | 30S ribosomal protein S19e. | 50S ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| dys | CPM_0263 | CPM_0264 | CPM_0263 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | SP family major facilitator superfamily permease. | 0.566 |
| dys | CPM_0751 | CPM_0264 | CPM_0751 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | phenylalanyl-tRNA synthetase subunit alpha. | 0.607 |
| dys | CPM_1440 | CPM_0264 | CPM_1440 | Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. | Agmatinase; Belongs to the arginase family. | 0.581 |
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