STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_02882-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (393 aa)    
Predicted Functional Partners:
CPM_0478
Glycine hydroxymethyltransferase.
  
 
 0.930
CPM_0411
Glycine dehydrogenase subunit 2.
  
 
 0.928
CPM_0410
Glycine dehydrogenase subunit 1.
  
 
 0.927
CPM_1945
Glycine/serine hydroxymethyltransferase.
  
 
 0.927
CPM_1854
FAD dependent oxidoreductase.
  
 
 0.923
CPM_0706
Glucose 1-dehydrogenase.
  
  
 0.762
CPM_0289
Threonyl-and alanyl-tRNA synthetase second additional domain.
  
 
 0.704
CPM_1231
Tricorn interacting acylaminoacyl-/prolyl-aminopeptidase.
  
 
 0.678
CPM_1943
Glycine cleavage system T protein (aminomethyltransferase).
  
 
 0.637
hel308
Ski2-like helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.
   
    0.612
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.