STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_0643SufS subfamily cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (420 aa)    
Predicted Functional Partners:
CPM_0640
FeS assembly ATPase SufC.
  
 0.995
CPM_0641
FeS assembly protein SufB.
 
 0.994
CPM_0644
FeS cluster assembly scaffold protein NifU.
 
 
 0.988
CPM_0642
FeS assembly protein SufD.
 
 
 0.959
CPM_0858
Thioredoxin reductase.
  
 
 0.916
CPM_0168
Cystathionine beta-lyase/cystathionine gamma-synthase.
    
 0.903
CPM_0697
Cystathionine gamma-synthase.
    
 0.903
CPM_0639
ArsR family transcriptional regulator.
       0.532
CPM_1917
SirA family protein.
 
 
 
 0.457
CPM_0539
Dimethylhistidine N-methyltransferase.
  
  
 0.409
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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