STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_0958Mevalonate pyrophosphate decarboxylase. (370 aa)    
Predicted Functional Partners:
CPM_0343
2-phosphoglycerate kinase.
 
  
  0.924
CPM_0049
Isopentenyl phosphate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids.
     
 0.920
CPM_0196
hydroxymethylglutaryl-CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family.
 
 
 0.654
CPM_0255
Major facilitator superfamily permease.
  
     0.645
CPM_1229
3-oxoacyl-(acyl-carrier-protein) synthase III.
  
 
 0.601
CPM_0626
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.595
CPM_0281
Type I geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.562
CPM_1656
Membrane-anchored cell surface protein.
 
     0.559
CPM_0937
TrmB family transcriptional regulator.
  
     0.524
CPM_0663
DHA3 family major facilitator superfamily permease.
  
     0.506
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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