STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1054Flippase. (516 aa)    
Predicted Functional Partners:
CPM_1055
dTDP-D-glucose 4,6-dehydratase.
  
  
 0.897
CPM_1056
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.895
CPM_1125
Dolichyl-phosphate beta-D-mannosyltransferase; ATT start codon.
  
  
 0.801
CPM_0387
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.777
CPM_1322
Oligosaccharyltransferase AglB.
 
   
 0.607
CPM_1128
Glycosyltransferase.
 
  
 0.578
CPM_0451
Mevalonate pyrophosphate decarboxylase.
  
     0.567
CPM_0343
2-phosphoglycerate kinase.
  
     0.561
CPM_1101
Fsr family major facilitator superfamily permease.
 
    0.537
CPM_0664
Nitroreductase.
 
   
 0.536
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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