STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1071ABC2-1 family ABC transporter ATPase. (296 aa)    
Predicted Functional Partners:
CPM_1070
ABC2-1 family ABC transporter permease.
  
 
 0.885
CPM_1069
Hypothetical protein.
       0.605
CPM_1567
50S ribosomal protein L2p.
  
 
   0.566
CPM_0060
ABC transporter permease.
  
 
 0.516
CPM_0170
ABC2-1 family ABC transporter permease.
  
 
 0.516
CPM_1813
LipidE family ABC transporter ATPase and permease.
 
0.485
CPM_0769
DrugE1 family ABC transporter permease.
 
    0.476
rpl14
50S ribosomal protein L14p; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
 
   0.474
CPM_1814
LipidE family ABC transporter ATPase and permease.
0.474
CPM_0715
DrugE1 family ABC transporter permease.
 
    0.439
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.