STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1129Nucleoside-diphosphate-sugar epimerase. (279 aa)    
Predicted Functional Partners:
CPM_0046
Nucleoside-diphosphate-sugar epimerase.
 
  
 
0.925
CPM_1013
Nucleoside-diphosphate-sugar epimerase.
 
  
 
0.924
CPM_0417
Nucleoside-diphosphate-sugar epimerase.
  
  
  0.914
rps3ae
30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.825
rps14
30S ribosomal protein S14p; Binds 16S rRNA, required for the assembly of 30S particles.
   
  0.819
rps19p
30S ribosomal protein S19p; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.819
rps12
30S ribosomal protein S12p; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
   
 0.818
CPM_1128
Glycosyltransferase.
  
  
 0.813
CPM_1130
Glycosyltransferase.
  
  
 0.813
CPM_1131
Glycosyltransferase.
  
   0.813
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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