STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1147Zinc ribbon domain protein. (373 aa)    
Predicted Functional Partners:
CPM_1146
Hypothetical protein.
 
     0.973
CPM_1148
Zinc finger protein.
       0.773
rps8e
30S ribosomal protein S8e.
       0.769
rtcB
RNA-2',3'-PO4:RNA-5'-OH ligase; Belongs to the RtcB family.
  
   0.758
CPM_0026
GTPase.
  
 0.678
purE
Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.645
CPM_0501
GTPase.
   
 0.632
CPM_1143
Nicotinate phosphoribosyltransferase.
       0.575
CPM_1817
Pantothenate kinase.
   
  0.560
CPM_0220
2-oxoacid dehydrogenase multienzyme complex, dihydrolipoyl acyltransferase (E2) component.
  
  0.558
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.