STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1308Multipass membrane protein. (211 aa)    
Predicted Functional Partners:
CPM_1310
Hypothetical protein.
       0.777
CPM_1311
Heme/copper-type cytochrome/quinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
       0.777
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.773
CPM_1312
Cytochrome c oxidase subunit II.
       0.773
CPM_1313
Membrane protein.
       0.773
CPM_1314
XRE family transcriptional regulator.
       0.636
CPM_1315
Zinc-dependent protease.
       0.459
CPM_1316
TPR repeats containing protein.
       0.459
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.