STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1311Heme/copper-type cytochrome/quinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (573 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.999
CPM_1312
Cytochrome c oxidase subunit II.
 
 0.999
CPM_1453
Cytochrome b subunit of the bc complex.
 
 
 0.999
CPM_1454
Rieske Fe-S protein.
  
 
 0.999
CPM_1698
NADH dehydrogenase subunit M.
  
 
 0.999
CPM_1704
NADH dehydrogenase subunit H.
  
 
 0.981
CPM_1697
NADH dehydrogenase subunit N.
  
 
 0.937
CPM_1706
NADH dehydrogenase subunit C.
   
 
 0.864
CPM_1708
NADH dehydrogenase subunit A.
   
 
 0.855
CPM_1705
NADH dehydrogenase subunit D.
   
 
 0.853
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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