STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1616CUT1 family ABC transporter permease. (305 aa)    
Predicted Functional Partners:
CPM_1617
CUT1 family ABC transporter permease.
 0.999
CPM_1618
Extracellular solute-binding protein.
 
 0.999
CPM_1640
CUT1 family ABC transporter permease.
 
 0.974
CPM_1248
CUT1 family ABC transporter permease.
 
 0.954
CPM_0844
CUT1 family ABC transporter permease.
 
 0.952
CPM_1615
CUT1 family ABC transporter ATPase.
 
  
  0.946
CPM_1246
CUT1 family ABC transporter ATPase.
 
  
  0.886
CPM_1638
CUT1 family ABC transporter ATPase.
 
  
  0.873
CPM_1364
CUT1 family ABC transporter permease.
 
 
0.870
CPM_1365
CUT1 family ABC transporter ATPase.
    
  0.812
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.