STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPM_1622GntR family transcriptional regulator. (135 aa)    
Predicted Functional Partners:
CPM_1621
Multipass membrane protein.
 
   
 0.944
CPM_1620
Beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
       0.551
CPM_0811
Nicotinamide-nucleotide adenylyltransferase.
   
    0.539
CPM_1623
Electron transfer flavoprotein subunit alpha.
       0.463
CPM_1624
Electron transfer flavoprotein subunit beta.
       0.463
CPM_1625
4Fe-4S ferredoxin.
       0.463
CPM_1626
Flavin-dependent dehydrogenase.
       0.463
CPM_0850
DtxR family metal-dependent transcription regulator.
 
    0.447
CPM_0493
Fe2+/Zn2+ uptake regulation protein, fur/PerR.
   
  
 0.415
Your Current Organism:
Cuniculiplasma divulgatum
NCBI taxonomy Id: 1673428
Other names: C. divulgatum, Cuniculiplasma divulgatum Golyshina et al. 2016, JCM 30642, Thermoplasmatales archaeon PM4, Thermoplasmatales archaeon S5, VKM B-2941, strain S5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.